雷蒙德氏棉DNase Ⅰ高敏感位点(DHSs)文库构建方法Construction of Gossypium raimondii DNase Ⅰ hypersensitive site library
王惠敏,刘玉玲,韦洋洋,张树林,刘震,卢全伟,杨太有,彭仁海
Wang Huimin,Liu Yuling,Wei Yangyang,Zhang Shulin,Liu Zhen,Lu Quanwei,Yang Taiyou,Peng Renhai
摘要(Abstract):
染色质DNA对DNase Ⅰ表现出高敏感性的位点(DNase Ⅰ hypersensitive sites,DHSs)多是顺式作用元件所在的位置,包括启动子、增强子、调节子和衰减子等.研究DHSs位点的数目及其动态变化是探明顺式作用元件功能、揭示基因表达调控机制,乃至进行基因编辑和创新遗传材料的重要辅助手段.本文借鉴水稻和拟南芥DHSs文库构建方法,通过优化设计,初步建立了二倍体雷蒙德氏棉(Gossypium raimondii D5)的DHSs文库,为深入进行棉花功能基因组研究奠定基础.
DNase Ⅰ hypersensitive sites(DHSs)usually are locations of the cis-regulatory elements on chromatin,such as promotors,enhancers,regulators and attenuators.Study on the number and dynamic changes of DHSs among the whole genome is an important auxiliary means to understand the function of cis-regulatory elements,reveal gene expression regulation mechanism,and even create new genetic material using genetic editing.Based on the construction of DHSs library in rice and Arabidopsis thaliana,DHSs library construction about diploid cotton Gossypium raimondii(D5)was established,which will lay the foundation for further research on functional genomics in cotton.
关键词(KeyWords):
雷蒙德氏棉;DNase I高敏感位点(DHSs);顺式作用元件;文库构建
Gossypiumraimondii;DNase Ⅰ hypersensitive sites(DHSs);cis-regulatory elements;library construction
基金项目(Foundation): 国家自然科学基金(31471548);; 河南省科技创新杰出人才(2018JR0009);; 棉花生物学国家重点实验室开放课题(CB2017A06);; 河南省高等学校重点科研项目(18A180010)
作者(Author):
王惠敏,刘玉玲,韦洋洋,张树林,刘震,卢全伟,杨太有,彭仁海
Wang Huimin,Liu Yuling,Wei Yangyang,Zhang Shulin,Liu Zhen,Lu Quanwei,Yang Taiyou,Peng Renhai
DOI: 10.16366/j.cnki.1000-2367.2018.03.017
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- 雷蒙德氏棉
- DNase I高敏感位点(DHSs)
- 顺式作用元件
- 文库构建
Gossypiumraimondii - DNase Ⅰ hypersensitive sites(DHSs)
- cis-regulatory elements
- library construction
- 王惠敏
- 刘玉玲
- 韦洋洋
- 张树林
- 刘震
- 卢全伟
- 杨太有
- 彭仁海
Wang Huimin - Liu Yuling
- Wei Yangyang
- Zhang Shulin
- Liu Zhen
- Lu Quanwei
- Yang Taiyou
- Peng Renhai
- 王惠敏
- 刘玉玲
- 韦洋洋
- 张树林
- 刘震
- 卢全伟
- 杨太有
- 彭仁海
Wang Huimin - Liu Yuling
- Wei Yangyang
- Zhang Shulin
- Liu Zhen
- Lu Quanwei
- Yang Taiyou
- Peng Renhai